STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB1Lamin B1. (586 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C.
    
0.977
BANF1
Barrier to autointegration factor 1.
   
 0.945
CASP6
Group XIIA secretory phospholipase A2.
   
 0.925
LMNB2
Lamin B2.
     
0.920
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.911
GZMB
Granzyme B.
    
 0.862
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
 0.860
LBR
Lamin B receptor.
   
 
 0.836
NUP153
Nucleoporin 153.
    
 
 0.826
BANF2
Barrier to autointegration factor 2.
   
 0.824
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.