STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAMACRNA guanine-7 methyltransferase activating subunit. (118 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.992
RNMT
RNA guanine-7 methyltransferase.
   
 0.991
AGO2
Argonaute RISC catalytic component 2.
     
 0.968
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.812
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.726
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.716
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.711
SYMPK
Symplekin.
   
 0.711
NCBP3
Nuclear cap binding subunit 3.
    
  0.689
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 
 0.660
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.