STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PODXL2Podocalyxin like 2. (610 aa)    
Predicted Functional Partners:
TPST1
Tyrosylprotein sulfotransferase 1.
    
  0.902
TPST2
Tyrosylprotein sulfotransferase 2.
    
  0.877
DUS2
Dihydrouridine synthase 2.
      
 0.714
ENSLCNP00005032862
annotation not available
    
 0.714
MAP6D1
MAP6 domain containing 1.
    
 0.656
PAXBP1
PAX3 and PAX7 binding protein 1.
      
 0.619
COPRS
Coordinator of PRMT5 and differentiation stimulator.
      
 0.619
COMTD1
catechol-O-methyltransferase domain containing 1.
      
 0.608
TMC4
Transmembrane channel like 4.
   
  
 0.607
LOC115509608
Neuroendocrine secretory protein 55.
   
 0.606
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.