STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNRF2Zinc and ring finger 2. (236 aa)    
Predicted Functional Partners:
TCTA
T cell leukemia translocation altered.
      
 0.525
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.519
GPATCH3
G-patch domain containing 3.
      
 0.519
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.519
RAB11FIP4
RAB11 family interacting protein 4.
      
 0.515
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 
 0.512
SNX20
Sorting nexin 20.
      
 0.512
ENSLCNP00005034028
annotation not available
    
 
 0.512
HDAC7
Histone deacetylase 7.
      
 0.472
METTL6
Methyltransferase like 6.
      
 0.457
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.