STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CENPBCentromere protein B. (606 aa)    
Predicted Functional Partners:
CENPA
Centromere protein A.
    
 
 0.932
INCENP
Inner centromere protein.
    
 
 0.781
KIF18A
Kinesin family member 18A.
      
 0.734
LOC115508501
Histone-lysine N-methyltransferase SETMAR.
   
 
 0.708
RO60
Ro60, Y RNA binding protein.
      
 0.622
ENSLCNP00005007373
annotation not available
      
 0.605
FAR1
Fatty acyl-CoA reductase 1.
      
 0.573
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.565
SGO1
Shugoshin 1.
    
 
 0.527
CDCA8
Cell division cycle associated 8.
      
 0.525
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.