STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115514812-2Histone H2B type 1-M. (126 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.743
H2AW
Histone H2A type 3.
 
 0.729
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.707
LOC115512383
Histone H2A.Z.
   
 0.660
ENSLCNP00005018761
annotation not available
   
 0.660
ENSLCNP00005011198
annotation not available
 
 
 0.650
H3C14
H3 clustered histone 14.
 
 
 0.650
H2AC1
Histone H2A-IV-like.
 
 0.643
LOC115514809
Histone H2A type 1-E-like.
 
 0.642
LOC115514809-2
Histone H2A type 1-E-like.
 
 0.642
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.