STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLDC2TBC/LysM-associated domain containing 2. (231 aa)    
Predicted Functional Partners:
CDC16
Cell division cycle 16.
      
 0.831
LRRC24
Leucine rich repeat containing 24.
      
 0.719
LEXM
Lymphocyte expansion molecule.
      
 0.672
ENSLCNP00005001400
annotation not available
      
 0.618
SPEM2
SPEM family member 2.
   
  
 0.577
RUNDC3B
RUN domain containing 3B.
   
  
 0.521
ATP2C2
ATPase secretory pathway Ca2+ transporting 2.
   
  
 0.511
VARS1
valyl-tRNA synthetase 1.
   
  
 0.463
SRSF6
Serine and arginine rich splicing factor 6.
      
 0.446
QARS1
glutaminyl-tRNA synthetase 1.
      
 0.440
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.