STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD2BTB domain containing 2. (474 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
   
 0.704
COPS3
COP9 signalosome subunit 3.
    
 0.665
COPS2
COP9 signalosome subunit 2.
   
  0.646
GPR152
G protein-coupled receptor 152.
     
 0.612
COPS5
COP9 signalosome subunit 5.
    
  0.605
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
      
 0.589
CABP4
Calcium binding protein 4.
      
 0.574
CUL1
Cullin 1.
   
 0.561
NEDD8
NEDD8 ubiquitin like modifier.
     
 0.549
RBX1
Ring-box 1.
   
 0.540
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.