STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN19Tetraspanin 19. (248 aa)    
Predicted Functional Partners:
TSPAN2
Tetraspanin 2.
      
 0.742
TSPAN9
Tetraspanin 9.
      
0.741
ENSLCNP00005024018
annotation not available
      
 0.741
TSPAN10
Tetraspanin 10.
      
 0.741
TSPAN14
Tetraspanin 14.
      
 0.741
TSPAN7
Tetraspanin 7.
      
0.741
TSPAN32
Tetraspanin 32.
      
 0.724
CLEC19A
C-type lectin domain containing 19A.
     
 0.625
ST8SIA6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6.
      
 0.615
FLOT1
Flotillin 1.
      
 0.615
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.