STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA5Golgin A5. (731 aa)    
Predicted Functional Partners:
CCDC91
Coiled-coil domain containing 91.
      
 0.919
VPS33B
VPS33B late endosome and lysosome associated.
   
 0.797
NCKAP1
NCK associated protein 1.
      
 0.797
CEP170
Centrosomal protein 170.
      
 0.794
SNAPIN
SNAP associated protein.
      
 0.793
GDI2
GDP dissociation inhibitor 2.
      
 0.792
CETN3
Centrin 3.
      
 0.790
FAM162B
Family with sequence similarity 162 member B.
      
 0.773
ENSLCNP00005019754
annotation not available
   
 0.747
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
   
 
 0.734
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.