STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM172AFamily with sequence similarity 172 member A. (457 aa)    
Predicted Functional Partners:
MCTP1
Multiple C2 and transmembrane domain containing 1.
      
 0.793
SLF1
SMC5-SMC6 complex localization factor 1.
      
 0.791
PLAC8L1
PLAC8 like 1.
      
 0.775
LMBR1
Limb development membrane protein 1.
      
 0.666
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
      
 0.521
NASP
Nuclear autoantigenic sperm protein.
      
 0.517
EFHC2
EF-hand domain containing 2.
      
 0.511
BORCS7
BLOC-1 related complex subunit 7.
      
 0.510
OIP5
Opa interacting protein 5.
      
 0.472
ENSLCNP00005004340
annotation not available
      
 0.459
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.