STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHphytanoyl-CoA 2-hydroxylase. (389 aa)    
Predicted Functional Partners:
PEX7
Peroxisomal biogenesis factor 7.
    
 0.844
AGPS
Alkylglycerone phosphate synthase.
   
 0.837
PEX6
Peroxisomal biogenesis factor 6.
      
 0.765
AMACR
alpha-methylacyl-CoA racemase.
   
  
 0.752
PEX10
Peroxisomal biogenesis factor 10.
   
 
 0.745
PHYHD1
phytanoyl-CoA dioxygenase domain containing 1.
   
 
0.744
PEX12
Peroxisomal biogenesis factor 12.
     
 0.743
ACAA1
acetyl-CoA acyltransferase 1.
   
 
 0.737
ANGEL2
Angel homolog 2.
      
 0.735
TATDN3
TatD DNase domain containing 3.
      
 0.735
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.