STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB8BRAB8B, member RAS oncogene family. (207 aa)    
Predicted Functional Partners:
MICAL2
F-actin-monooxygenase MICAL2.
   
 0.999
RILPL2
Rab interacting lysosomal protein like 2.
   
 
 0.999
RAB3IP
RAB3A interacting protein.
    
 0.962
WDR41
WD repeat domain 41.
     
 0.947
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.923
SLC2A4
Solute carrier family 2 member 4.
    
 0.908
GDI2
GDP dissociation inhibitor 2.
   
 0.897
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.885
RAB39B
RAB39B, member RAS oncogene family.
  
 
0.873
PLK1
Polo like kinase 1.
    
 0.872
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.