STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS27ARibosomal protein S27a. (156 aa)    
Predicted Functional Partners:
ENSLCNP00005001011
annotation not available
   
 0.999
ENSLCNP00005009811
annotation not available
   
 0.999
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
0.999
LOC115525723
Putative ubiquitin-like protein FUBI-like protein ENSP00000310146.
   
 0.999
ENSLCNP00005021712
annotation not available
   
 0.999
ENSLCNP00005033272
annotation not available
   
 0.999
NBR1
NBR1 autophagy cargo receptor.
   
 0.997
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
0.996
USP7
Ubiquitin specific peptidase 7.
   
 0.996
ENSLCNP00005029829
annotation not available
  
0.996
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.