STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHD1Pleckstrin homology and coiled-coil domain containing D1. (506 aa)    
Predicted Functional Partners:
SLC10A1
Solute carrier family 10 member 1.
      
 0.773
CBFB
Core-binding factor subunit beta.
      
 0.526
SLC39A9
Solute carrier family 39 member 9.
      
 0.525
ACOT8
acyl-CoA thioesterase 8.
      
 0.523
KLHDC10
Kelch domain containing 10.
   
  
 0.512
SLC39A6
Solute carrier family 39 member 6.
      
 0.508
TENM4
Teneurin transmembrane protein 4.
   
  
 0.471
ENSLCNP00005021399
annotation not available
      
 0.459
SRSF5
Serine and arginine rich splicing factor 5.
      
 0.455
GALNT1
Polypeptide N-acetylgalactosaminyltransferase 1.
      
 0.446
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.