STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP5Opa interacting protein 5. (230 aa)    
Predicted Functional Partners:
MIS18A
MIS18 kinetochore protein A.
   
 0.991
MIS18BP1
MIS18 binding protein 1.
   
 0.929
CENPA
Centromere protein A.
   
 0.886
ENSLCNP00005006717
annotation not available
   
  
 0.864
SKA3
Spindle and kinetochore associated complex subunit 3.
   
  
 0.828
KIF2C
Kinesin family member 2C.
   
  
 0.809
PBK
PDZ binding kinase.
   
  
 0.787
RAD51AP1
RAD51 associated protein 1.
   
  
 0.785
CDCA8
Cell division cycle associated 8.
   
  
 0.780
ENSLCNP00005017482
annotation not available
   
 0.771
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.