STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGXT2Alanine--glyoxylate aminotransferase 2. (493 aa)    
Predicted Functional Partners:
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.959
UPB1
Beta-ureidopropionase 1.
  
 
 0.951
GLDC
Glycine decarboxylase.
  
 
 0.947
PCCA
propionyl-CoA carboxylase subunit alpha.
     
 0.946
PIPOX
Pipecolic acid and sarcosine oxidase.
  
 
 0.942
BCAT1
Branched chain amino acid transaminase 1.
   
 
 0.939
DAO
D-amino acid oxidase.
  
 
 0.937
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.936
CTH
Cystathionine gamma-lyase.
   
 
 0.934
ALDH6A1
Aldehyde dehydrogenase 6 family member A1.
 
 
 
 0.931
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.