STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM43Transmembrane protein 43. (400 aa)    
Predicted Functional Partners:
ENDOD1
Endonuclease domain containing 1.
    
 0.809
NCLN
Nicalin.
      
 0.798
TMEM33
Transmembrane protein 33.
      
 0.791
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
      
 0.757
CLPTM1L
CLPTM1 like.
      
 0.746
HACD3
3-hydroxyacyl-CoA dehydratase 3.
      
 0.742
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
      
 0.728
PKP2
Plakophilin 2.
      
 0.659
DSC3
Desmocollin 3.
      
 0.646
ENSLCNP00005016944
annotation not available
      
 0.641
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.