STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAVCR2Hepatitis A virus cellular receptor 2. (290 aa)    
Predicted Functional Partners:
LGALS9
Galectin 9.
    
 0.888
TNFSF4
TNF superfamily member 4.
  
  
 0.737
TNFRSF4
TNF receptor superfamily member 4.
    
 
 0.721
PDCD1
Programmed cell death 1.
   
 0.679
CD274
CD274 molecule.
     
 0.672
CD80
CD80 molecule.
  
 
 0.655
TIGIT
T cell immunoreceptor with Ig and ITIM domains.
   
  
 0.648
LAG3
Lymphocyte activating 3.
   
  
 0.642
PDCD1LG2
Programmed cell death 1 ligand 2.
     
 0.604
IFNG
Interferon gamma.
   
 
 0.579
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.