STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A1APSolute carrier family 4 member 1 adaptor protein. (742 aa)    
Predicted Functional Partners:
NOL7
Nucleolar protein 7.
      
 0.595
PRPF38A
pre-mRNA processing factor 38A.
   
  
 0.542
CNOT10
CCR4-NOT transcription complex subunit 10.
   
  
 0.542
CNOT4
CCR4-NOT transcription complex subunit 4.
   
  
 0.531
EIF2B4
Eukaryotic translation initiation factor 2B subunit delta.
   
  
 0.529
TLK2
Tousled like kinase 2.
   
  
 0.526
DNAJC14
DnaJ heat shock protein family (Hsp40) member C14.
      
 0.521
ZKSCAN5
Zinc finger with KRAB and SCAN domains 5.
      
 0.519
ZNF346
Zinc finger protein 346.
      
 0.518
RBM45
RNA binding motif protein 45.
      
 0.515
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.