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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC5A8Solute carrier family 5 member 8. (611 aa)    
Predicted Functional Partners:
CHMP4A
Charged multivesicular body protein 4A.
   
    0.816
MCTP2
Multiple C2 and transmembrane domain containing 2.
      
 0.725
OR6C75
Olfactory receptor 6C75.
      
 0.675
SLC23A1
Solute carrier family 23 member 1.
 
 
  
 0.646
SULT1C4
Sulfotransferase family 1C member 4.
   
  
 0.620
ANO4
Anoctamin 4.
      
 0.611
FAT2
FAT atypical cadherin 2.
      
 0.607
NUB1
Negative regulator of ubiquitin like proteins 1.
      
 0.605
SLC13A2
Solute carrier family 13 member 2.
   
  
 0.595
SLC44A3
Solute carrier family 44 member 3.
     
 0.578
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.