STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB10RAB10, member RAS oncogene family. (200 aa)    
Predicted Functional Partners:
SLC2A4
Solute carrier family 2 member 4.
    
 0.949
RILPL2
Rab interacting lysosomal protein like 2.
   
 
 0.935
TBC1D1
TBC1 domain family member 1.
    
 0.911
RILPL1
Rab interacting lysosomal protein like 1.
    
 0.867
GDI2
GDP dissociation inhibitor 2.
   
 0.866
ENSLCNP00005009466
annotation not available
    
 0.862
RAB14
RAB14, member RAS oncogene family.
  
0.840
DENND4A
DENN domain containing 4A.
    
 0.832
RAB3IP
RAB3A interacting protein.
    
 0.778
CHM
CHM Rab escort protein.
    
 0.766
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.