STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPRV1Aspartic peptidase retroviral like 1. (355 aa)    
Predicted Functional Partners:
NIPAL4
NIPA like domain containing 4.
      
 0.684
PNPLA1
Patatin like phospholipase domain containing 1.
      
 0.682
SEC11C
SEC11 homolog C, signal peptidase complex subunit.
      
 0.601
ENSLCNP00005020306
annotation not available
   
  
 0.537
TGM1
Transglutaminase 1.
   
  
 0.537
CASP14
Caspase 14.
   
  
 0.533
METAP2
Methionyl aminopeptidase 2.
      
 0.520
FCGBP
Fc fragment of IgG binding protein.
      
 0.520
KRT71
Keratin 71.
      
 0.519
KRT73
Keratin, type II cytoskeletal 73.
      
 0.519
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.