STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD2ATP binding cassette subfamily D member 2. (742 aa)    
Predicted Functional Partners:
ABCD3
ATP binding cassette subfamily D member 3.
  
0.925
ABCD4
ATP binding cassette subfamily D member 4.
   
0.827
PEX19
Peroxisomal biogenesis factor 19.
    
 0.755
PEX13
Peroxisomal biogenesis factor 13.
   
 
 0.702
PEX3
Peroxisomal biogenesis factor 3.
   
 0.692
PEX14
Peroxisomal biogenesis factor 14.
   
 0.656
HNF1A
HNF1 homeobox A.
      
 0.649
PEX12
Peroxisomal biogenesis factor 12.
   
 
 0.640
PEX16
Peroxisomal biogenesis factor 16.
     
 0.634
LMBRD1
LMBR1 domain containing 1.
    
 0.630
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.