STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP1Ubiquitin specific peptidase 1. (783 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
 0.999
FANCD2
FA complementation group D2.
    
 0.980
FANCI
FA complementation group I.
   
 0.952
FANCL
FA complementation group L.
     
 0.948
PCNA
Proliferating cell nuclear antigen.
   
  0.895
RPS27A
Ribosomal protein S27a.
    
  0.864
ENSLCNP00005014697
annotation not available
    
  0.864
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.859
ENSLCNP00005029829
annotation not available
    
 0.859
WDR20
WD repeat domain 20.
   
 0.824
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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