STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD1LY6/PLAUR domain containing 1. (141 aa)    
Predicted Functional Partners:
CALB1
Calbindin 1.
   
  
 0.544
NTNG1
Netrin G1.
      
 0.526
DAPL1
Death associated protein like 1.
      
 0.523
DEFB124
Defensin beta 124.
      
 0.521
VAT1L
Vesicle amine transport 1 like.
      
 0.520
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
      
 0.509
CCDC102B
Coiled-coil domain containing 102B.
      
 0.497
C1orf198
Chromosome D2 C1orf198 homolog.
      
 0.497
NDNF
Neuron derived neurotrophic factor.
      
 0.472
BRINP3
BMP/retinoic acid inducible neural specific 3.
      
 0.459
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.