STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMPSTE24Zinc metallopeptidase STE24. (475 aa)    
Predicted Functional Partners:
ICMT
Isoprenylcysteine carboxyl methyltransferase.
    
 0.981
RCE1
Ras converting CAAX endopeptidase 1.
    
 0.962
FNTA
Farnesyltransferase, CAAX box, alpha.
     
 0.948
FNTB
Farnesyltransferase, CAAX box, beta.
     
 0.940
LMNB2
Lamin B2.
    
 
 0.760
LMNB1
Lamin B1.
    
 
 0.665
LMNA
Lamin A/C.
    
 
 0.629
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
  
 0.595
CHURC1
Churchill domain containing 1.
     
 0.587
GRPEL1
GrpE like 1, mitochondrial.
  
  
 0.555
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.