STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3. (957 aa)    
Predicted Functional Partners:
ENSLCNP00005028641
annotation not available
   
 
 0.908
RAN
RAN, member RAS oncogene family.
   
 
 0.806
NUP153
Nucleoporin 153.
   
 
 0.802
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.800
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
    0.793
SRSF9
Serine and arginine rich splicing factor 9.
   
 
 0.787
SRSF6
Serine and arginine rich splicing factor 6.
   
 
 0.771
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.771
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.771
ADGRD1
Adhesion G protein-coupled receptor D1.
   
 
 0.771
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.