STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115524959Leucine-rich repeat-containing protein 51. (192 aa)    
Predicted Functional Partners:
SF3A3
Splicing factor 3a subunit 3.
   
 0.937
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.928
SF3B1
Splicing factor 3b subunit 1.
   
 0.921
XAB2
XPA binding protein 2.
   
 0.918
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.918
SF3B3
Splicing factor 3b subunit 3.
    
 0.917
BUD31
BUD31 homolog.
   
 0.917
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.916
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.916
SF3B2
Splicing factor 3b subunit 2.
   
 0.915
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.