STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCS1LMitochondrial chaperone BCS1. (419 aa)    
Predicted Functional Partners:
MRPL16
Mitochondrial ribosomal protein L16.
   
 
 0.822
UQCC1
Ubiquinol-cytochrome-c reductase complex assembly factor 1.
   
  
 0.820
LYRM7
LYR motif containing 7.
    
 
 0.808
MRPS16
Mitochondrial ribosomal protein S16.
  
 0.767
PDSS1
Decaprenyl diphosphate synthase subunit 1.
  
  
 0.761
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.751
MRPS9
Mitochondrial ribosomal protein S9.
  
 0.750
MTG1
Mitochondrial ribosome associated GTPase 1.
   
  
 0.750
MRPL19
Mitochondrial ribosomal protein L19.
  
 
 0.748
MRPS7
Mitochondrial ribosomal protein S7.
   
   0.745
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.