STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM45BTransmembrane protein 45B. (275 aa)    
Predicted Functional Partners:
SH2D7
SH2 domain containing 7.
      
 0.773
BVES
Blood vessel epicardial substance.
      
 0.687
LRRN4CL
LRRN4 C-terminal like.
      
 0.624
PDCL2
Phosducin like 2.
      
 0.618
SAPCD2
Suppressor APC domain containing 2.
      
 0.616
KRT23
Keratin 23.
      
 0.613
IGSF9B
Immunoglobulin superfamily member 9B.
      
 0.609
TMPRSS11A
Transmembrane serine protease 11A.
      
 0.593
GNG13
G protein subunit gamma 13.
      
 0.578
TSPAN6
Tetraspanin 6.
      
 0.573
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.