STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA10Cholinergic receptor nicotinic alpha 10 subunit. (450 aa)    
Predicted Functional Partners:
SLURP1
Secreted LY6/PLAUR domain containing 1.
     
 0.854
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.796
CHRNA7
Cholinergic receptor nicotinic alpha 7 subunit.
  
0.750
CAB39L
Calcium binding protein 39 like.
      
 0.717
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
  
 
0.678
CHRND
Cholinergic receptor nicotinic delta subunit.
   
 
0.647
GJB2
Gap junction protein beta 2.
      
 0.596
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
  
0.587
SKOR2
SKI family transcriptional corepressor 2.
      
 0.570
SLC26A5
Solute carrier family 26 member 5.
      
 0.525
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.