STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS72Vacuolar protein sorting 72 homolog. (364 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
    
 0.992
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.992
RUVBL2
RuvB like AAA ATPase 2.
    
 0.987
MRGBP
MRG domain binding protein.
   
 0.984
YEATS4
YEATS domain containing 4.
    
 0.981
KAT5
Lysine acetyltransferase 5.
   
 0.968
EP400
E1A binding protein p400.
    
 0.967
ACTR6
Actin related protein 6.
    
 0.965
MORF4L2
Mortality factor 4 like 2.
    
 0.964
MEAF6
MYST/Esa1 associated factor 6.
    
 0.961
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.