STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NTMNeurotrimin. (355 aa)    
Predicted Functional Partners:
MAGI2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
   
  
 0.523
TESPA1
Thymocyte expressed, positive selection associated 1.
      
 0.522
RNF181
Ring finger protein 181.
      
 0.467
ENSLCNP00005011906
annotation not available
    
 0.455
CF1H1orf226
Chromosome F1 C1orf226 homolog.
      
 0.449
ZC3H12C
Zinc finger CCCH-type containing 12C.
      
 0.445
SERTAD1
SERTA domain containing 1.
      
 0.445
CDKL3
Cyclin dependent kinase like 3.
      
 0.414
SLITRK1
SLIT and NTRK like family member 1.
   
 0.413
USP39
Ubiquitin specific peptidase 39.
      
 0.410
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.