STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF638Zinc finger protein 638. (1982 aa)    
Predicted Functional Partners:
NIPBL
NIPBL cohesin loading factor.
   
 0.860
SENP6
SUMO specific peptidase 6.
   
   0.832
U2SURP
U2 snRNP associated SURP domain containing.
   
    0.762
SF3B1
Splicing factor 3b subunit 1.
   
    0.760
ZFC3H1
Zinc finger C3H1-type containing.
   
   0.747
CEP250
Centrosomal protein 250.
  
 
 0.706
ENSLCNP00005015481
annotation not available
    
 0.703
NTAN1
N-terminal asparagine amidase.
      
 0.684
TMEM82
Transmembrane protein 82.
      
 0.684
ENOX2
ecto-NOX disulfide-thiol exchanger 2.
      
 0.663
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.