STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A5Solute carrier family 30 member 5. (765 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
   
 
0.762
TSPAN13
Tetraspanin 13.
      
 0.650
TM9SF3
Transmembrane 9 superfamily member 3.
   
    0.609
PIK3AP1
Phosphoinositide-3-kinase adaptor protein 1.
      
 0.590
SLC39A7
Solute carrier family 39 member 7.
  
 0.580
SLC39A6
Solute carrier family 39 member 6.
  
 0.565
FAM117A
Family with sequence similarity 117 member A.
   
 
 0.523
SLC25A28
Solute carrier family 25 member 28.
      
 0.518
SLC30A9
Solute carrier family 30 member 9.
  
 
 0.500
SLC39A3
Solute carrier family 39 member 3.
   
 
 0.498
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.