STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYSFDysferlin. (2103 aa)    
Predicted Functional Partners:
CAV3
Caveolin 3.
    
 0.910
SGCG
Sarcoglycan gamma.
    
 
 0.766
SGCD
Sarcoglycan delta.
      
 0.747
CAPN3
Calpain 3.
      
 0.725
ANXA2
Annexin A2.
   
 0.718
ANXA1
Annexin A1.
   
 0.692
AHNAK
AHNAK nucleoprotein.
   
  
 0.664
LAMA2
Laminin subunit alpha 2.
   
  
 0.640
SGCA
Sarcoglycan alpha.
      
 0.626
MYOM2
Myomesin 2.
    
 
 0.607
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.