STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARVELD2MARVEL domain containing 2. (559 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.949
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.795
CGNL1
Cingulin like 1.
      
 0.745
CDK9
Cyclin dependent kinase 9.
    
 0.672
TJP3
Tight junction protein 3.
   
 0.638
ENSLCNP00005025938
annotation not available
   
 0.628
EAF1
ELL associated factor 1.
    
 0.589
EAF2
ELL associated factor 2.
    
 0.589
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.587
OCLN
Occludin.
   
0.583
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.