STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGO1Shugoshin 1. (529 aa)    
Predicted Functional Partners:
PLK1
Polo like kinase 1.
   
 0.988
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
 0.975
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 0.975
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
    
 0.971
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.971
NUDC
Nuclear distribution C, dynein complex regulator.
   
 
 0.970
PPP2R5D
Protein phosphatase 2 regulatory subunit B'delta.
    
 0.969
CDC20B
Cell division cycle 20B.
   
 0.962
CDC20
Cell division cycle 20.
   
 0.962
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
 0.957
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.