STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBTaxilin beta. (687 aa)    
Predicted Functional Partners:
PIFO
Primary cilia formation.
      
 0.760
CDHR3
Cadherin related family member 3.
      
 0.751
RNF122
Ring finger protein 122.
      
 0.743
TMEM236
Transmembrane protein 236.
      
 0.718
SHISA6
Shisa family member 6.
      
 0.680
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
      
 0.676
RRAD
RRAD, Ras related glycolysis inhibitor and calcium channel regulator.
      
 0.651
CDH7
Cadherin 7.
      
 0.626
PRPF6
pre-mRNA processing factor 6.
      
 0.618
TXLNA
Taxilin alpha.
  
 
  
0.554
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.