STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNLZDNL-type zinc finger. (169 aa)    
Predicted Functional Partners:
HSPA9
Heat shock protein family A (Hsp70) member 9.
    
 0.865
TIMM13
Translocase of inner mitochondrial membrane 13.
   
  
 0.651
DRAP1
DR1 associated protein 1.
   
  
 0.627
PAM16
Mitochondrial import inner membrane translocase subunit TIM16.
   
 
 0.614
CERT1
Ceramide transporter 1.
      
 0.607
VARS2
valyl-tRNA synthetase 2, mitochondrial.
      
 0.606
TIMM17A
Translocase of inner mitochondrial membrane 17A.
   
 
 0.593
TOMM40
Translocase of outer mitochondrial membrane 40.
   
  
 0.540
PHF19
PHD finger protein 19.
      
 0.520
TSPAN15
Tetraspanin 15.
      
 0.518
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.