STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC61BSEC61 translocon beta subunit. (96 aa)    
Predicted Functional Partners:
RPL4
Ribosomal protein L4.
   
 
 0.999
SEC61G
SEC61 translocon gamma subunit.
   
 0.999
RPL9
Ribosomal protein L9.
   
   0.999
RPL3
Ribosomal protein L3.
    
   0.999
RPL15
Ribosomal protein L15.
   
 
 0.999
SEC63
SEC63 homolog, protein translocation regulator.
    
 0.999
RPL27
Ribosomal protein L27.
   
 
 0.999
RPL23
Ribosomal protein L23.
   
   0.999
RPL13A
Ribosomal protein L13a.
   
   0.999
RPL13
Ribosomal protein L13.
    
   0.999
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.