STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTA2Actin alpha 2, smooth muscle. (385 aa)    
Predicted Functional Partners:
MYH6
Myosin heavy chain 6.
   
 0.920
MYH7
Myosin heavy chain 7.
   
 0.920
MYO6
Myosin VI.
    
 0.873
MYL9
Myosin light chain 9.
   
 0.855
MYH11
Myosin heavy chain 11.
   
 0.839
MYL6B
Myosin light chain 6B.
   
 0.838
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
 0.809
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.792
ACTG2
Actin gamma 2, smooth muscle.
  
  
 
0.785
TPM4
Tropomyosin 4.
   
 0.778
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.