STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBTD1Ubiquitin domain containing 1. (227 aa)    
Predicted Functional Partners:
KIAA2026
KIAA2026 ortholog.
    
 
 0.596
THUMPD2
THUMP domain containing 2.
      
 0.519
SUGCT
succinyl-CoA:glutarate-CoA transferase.
      
 0.512
TMUB1
Transmembrane and ubiquitin like domain containing 1.
      
 0.510
ZDHHC16
Zinc finger DHHC-type containing 16.
      
 0.447
RRP12
Ribosomal RNA processing 12 homolog.
      
 0.445
EXOSC1
Exosome component 1.
      
 0.444
MOCOS
Molybdenum cofactor sulfurase.
      
 0.440
UBQLN4
Ubiquilin 4.
    
 
 0.420
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 
 0.413
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.