STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK2AP1Cyclin dependent kinase 2 associated protein 1. (114 aa)    
Predicted Functional Partners:
GATAD2A
GATA zinc finger domain containing 2A.
    
 
 0.922
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.796
CHD3
Chromodomain helicase DNA binding protein 3.
    
 
 0.780
B3GNT4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4.
      
 0.755
CHD4
Chromodomain helicase DNA binding protein 4.
    
 
 0.734
ZNF219
Zinc finger protein 219.
    
   0.705
MTA3
Metastasis associated 1 family member 3.
    
 
 0.680
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 
 0.676
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 
 0.651
CCNI
Cyclin I.
   
  
 0.612
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.