STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA5ACarbonic anhydrase 5A. (310 aa)    
Predicted Functional Partners:
C17orf67
Chromosome E1 C17orf67 homolog.
      
 0.522
LRRC49
Leucine rich repeat containing 49.
      
 0.518
GRWD1
Glutamate rich WD repeat containing 1.
   
  
 0.503
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.498
RPF2
Ribosome production factor 2 homolog.
   
 
 0.496
ENSLCNP00005034865
annotation not available
   
 
 0.496
WDR43
WD repeat domain 43.
   
    0.471
GTPBP4
GTP binding protein 4.
   
  
 0.466
WDR36
WD repeat domain 36.
   
    0.461
PWP2
PWP2 small subunit processome component.
   
    0.461
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.