STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC13DUnc-13 homolog D. (1113 aa)    
Predicted Functional Partners:
CHPF
Chondroitin polymerizing factor.
      
 0.746
CMTM6
CKLF like MARVEL transmembrane domain containing 6.
      
 0.612
STX19
Syntaxin 19.
      
 0.523
STX11
Syntaxin 11.
      
 0.523
PHB2
Prohibitin 2.
      
 0.519
MRAP2
Melanocortin 2 receptor accessory protein 2.
      
 0.519
GALNT2
Polypeptide N-acetylgalactosaminyltransferase 2.
      
 0.519
MAP2K4
Mitogen-activated protein kinase kinase 4.
      
 0.472
ARHGEF7
Rho guanine nucleotide exchange factor 7.
      
 0.471
AGFG1
ArfGAP with FG repeats 1.
      
 0.454
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.