STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1 subunit A. (959 aa)    
Predicted Functional Partners:
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 0.992
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.965
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.929
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.868
WDR73
WD repeat domain 73.
   
 0.842
MCM3
Minichromosome maintenance complex component 3.
   
  
 0.838
MCM5
Minichromosome maintenance complex component 5.
   
  
 0.835
MCM2
Minichromosome maintenance complex component 2.
   
 
 0.828
PCNA
Proliferating cell nuclear antigen.
   
   0.816
CBX5
Chromobox 5.
   
 
 0.808
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.