STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPRBSRP receptor subunit beta. (271 aa)    
Predicted Functional Partners:
SRPRA
SRP receptor subunit alpha.
   
 0.999
SRP54
Signal recognition particle 54.
   
 
 0.940
SRP68
Signal recognition particle 68.
   
 
 0.937
SRP72
Signal recognition particle 72.
    
 
 0.935
SRP19
Signal recognition particle 19.
   
 
 0.913
SRP14
Signal recognition particle 14.
   
 
 0.864
ATR
ATR serine/threonine kinase.
    
   0.859
SRP9
Signal recognition particle 9.
   
 0.855
RPL4
Ribosomal protein L4.
    
 
 0.853
RPL7A
Ribosomal protein L7a.
   
   0.747
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.