STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAT1Branched chain amino acid transaminase 1. (398 aa)    
Predicted Functional Partners:
SDSL
Serine dehydratase like.
  
 
 0.957
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.953
BCKDHA
Transmembrane protein 91.
  
 
 0.952
CTH
Cystathionine gamma-lyase.
   
 0.943
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 
 0.939
SDS
Serine dehydratase.
  
 
 0.933
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
  
 0.926
GCLM
Glutamate-cysteine ligase modifier subunit.
   
 0.914
GCLC
Glutamate-cysteine ligase catalytic subunit.
     
 0.912
FPGS
Folylpolyglutamate synthase.
    
 0.872
Your Current Organism:
Lynx canadensis
NCBI taxonomy Id: 61383
Other names: Canada lynx, Felis canadensis, L. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.